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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 17WGBS
  • 13RRBS
Assay category
  • 30DNA methylation
Date released
  • 17July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3075bam
  • 2868bigWig
  • 1666bed narrowPeak
  • 1444tsv
  • 1101fastq
  • 966bigBed narrowPeak
  • 391tagAlign
  • 300bed broadPeak
  • 263bigBed broadPeak
  • 252bed bed3+
  • 161txt
  • 73zippedFastqFolder
  • 64xls
  • 30bed bedMethyl
  • 30bigBed bedMethyl
  • 18bedpe bed3+
  • 17hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 3hdf5
  • 3tar
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 30Homo sapiens
Biosample type
  • 25tissue
  • 4primary cell
  • 1cell line
Organ
  • 8heart
  • epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 30AMP
Genome assembly (visualization)
  • 17GRCh38
  • 13hg19
Lab
  • 30AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
organ_slims!
  • epithelium
BIOSAMPLE
ASSAY

30 results

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Clear Filters
WGBS
RRBS
tissue
heart left ventricle21
pancreas21
adipose tissue2
body of pancreas2
heart right ventricle2
primary cell
cardiac fibroblast1
cardiac muscle cell1
skeletal muscle cell1
skeletal muscle myoblast1
cell line
HepG21
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