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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18RRBS
  • 17WGBS
Assay category
  • 35DNA methylation
Date released
  • 22July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3385bam
  • 3163bigWig
  • 1784bed narrowPeak
  • 1596tsv
  • 1358fastq
  • 1036bigBed narrowPeak
  • 398tagAlign
  • 318bed broadPeak
  • 281bigBed broadPeak
  • 270bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 35bed bedMethyl
  • 35bigBed bedMethyl
  • 23bedpe bed3+
  • 23hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 5hdf5
  • 4tar
  • 3cool
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1tbi
  • 1vcf
Organism
  • 35Homo sapiens
Biosample type
  • 25tissue
  • 9primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • 2vasculature
  • 1blood vessel
  • eye
  • 1limb
  • 1pericardium
Project
  • 35AMP
Genome assembly (visualization)
  • 18hg19
  • 17GRCh38
Lab
  • 35AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • eye
BIOSAMPLE
ASSAY

35 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
adipose tissue2
body of pancreas2
heart right ventricle2
skeletal muscle tissue2
spleen2
aorta1
brain1
heart1
islet of Langerhans1
kidney1
liver1
muscle of leg1
pericardium1
right cardiac atrium1
primary cell
cardiac fibroblast1
cardiac muscle cell1
choroid plexus epithelial cell1
epithelial cell of proximal tubule1
hepatocyte1
kidney epithelial cell1
renal cortical epithelial cell1
skeletal muscle cell1
skeletal muscle myoblast1
cell line
HepG21
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