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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 18RRBS
  • 16WGBS
Assay category
  • 34DNA methylation
Date released
  • 21July, 2019
  • 7November, 2018
  • 6August, 2017
Available data
  • 3207bam
  • 3014bigWig
  • 1684bed narrowPeak
  • 1532tsv
  • 1352fastq
  • 959bigBed narrowPeak
  • 392tagAlign
  • 305bed broadPeak
  • 268bigBed broadPeak
  • 260bed bed3+
  • 161txt
  • 153zippedFastqFolder
  • 64xls
  • 34bed bedMethyl
  • 34bigBed bedMethyl
  • 21bedpe bed3+
  • 20hic
  • 12bed bed3
  • 8csv
  • 7bed bedgraph
  • 3cool
  • 3hdf5
  • 3tar
  • 2ibed
  • 1bedpe
  • 1tagAlign bed3+
  • 1vcf
Organism
  • 34Homo sapiens
Biosample type
  • 24tissue
  • 9primary cell
  • 1cell line
Organ
  • 8heart
  • 6epithelium
  • 6pancreas
  • 4kidney
  • 4musculature of body
  • 3connective tissue
  • 3liver
  • 2adipose tissue
  • 2brain
  • 2spleen
  • vasculature
  • 1blood vessel
  • 1eye
  • 1limb
  • 1pericardium
Project
  • 34AMP
Genome assembly (visualization)
  • 18hg19
  • 16GRCh38
Lab
  • 34AMP-T2D consortium
Audit category:
  • 2inconsistent ontology term
organ_slims!
  • vasculature
BIOSAMPLE
ASSAY

34 results

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Clear Filters
RRBS
WGBS
tissue
heart left ventricle12
pancreas12
adipose tissue2
body of pancreas2
heart right ventricle2
primary cell
cardiac fibroblast1
cardiac muscle cell1
epithelial cell of proximal tubule1
hepatocyte1
kidney epithelial cell1
cell line
HepG21
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