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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
4
ATAC-seq
1
ChIP-seq
Assay category
13
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
6
June, 2019
4
February, 2021
2
August, 2017
1
November, 2018
1
November, 2020
Available data
591
bam
568
bigWig
476
tsv
99
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
14
Homo sapiens
Biosample type
6
primary cell
5
in vitro differentiated cells
3
tissue
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
14
connective tissue
13
blood vessel
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
hg19
9
GRCh38
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ATAC-seq
ChIP-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
4
tissue
omental fat pad
2
subcutaneous abdominal adipose tissue
1
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