Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
3
ChIP-seq
1
FAIRE-seq
Assay category
33
DNA accessibility
3
DNA binding
Target of assay
histone
91
histone modification
58
broad histone mark
33
narrow histone mark
3
RNA binding protein
3
transcription factor
Date released
30
June, 2019
3
November, 2017
2
November, 2018
1
July, 2019
Available data
77
bam
56
bigWig
36
bed narrowPeak
36
bigBed narrowPeak
35
bed bed3+
35
bed broadPeak
35
bigBed broadPeak
26
tsv
19
tagAlign
11
fastq
3
hdf5
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3
0
bed bedgraph
0
bedpe
Organism
36
Homo sapiens
Biosample type
28
tissue
8
primary cell
Organ
323
liver
82
kidney
53
blood
53
bodily fluid
47
epithelium
43
pancreas
38
heart
36
brain
36
limb
33
musculature of body
23
connective tissue
18
ureter
17
vasculature
14
blood vessel
9
adipose tissue
7
spleen
5
artery
5
eye
3
vein
2
nerve
Project
36
AMP
Genome assembly (visualization)
35
GRCh38
26
hg19
Lab
36
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
ChIP-seq
FAIRE-seq
tissue
brain
14
frontal cortex
2
1
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
Download