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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
single cell RNA-seq
4
ATAC-seq
Assay category
7
Transcription
4
DNA accessibility
Date released
10
February, 2021
1
November, 2018
September, 2018
Available data
3320
bam
3092
bigWig
1767
bed narrowPeak
1574
tsv
1285
fastq
1028
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
271
bed bed3+
158
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
7
csv
5
hdf5
4
bed bedgraph
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
6
tissue
4
in vitro differentiated cells
1
primary cell
Organ
5
kidney
4
connective tissue
1
liver
Project
11
AMP
Genome assembly (visualization)
4
hg19
Lab
11
AMP-T2D consortium
Struan F.A. Grant, CHOP
Audit category:
5
audit script error
lab.title!
Struan F.A. Grant, CHOP
month_released!
September, 2018
BIOSAMPLE
ASSAY
11 results
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single cell RNA-seq
ATAC-seq
tissue
kidney
5
liver
1
in vitro differentiated cells
adipocyte
4
primary cell
pancreatic cell
1
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