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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
2
pCHi-C
Assay category
3
DNA accessibility
Date released
3
February, 2023
2
March, 2020
Available data
2799
bam
2599
bigWig
1742
bed narrowPeak
1257
fastq
1121
tsv
1014
bigBed narrowPeak
376
tagAlign
312
bed broadPeak
276
bigBed broadPeak
246
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
23
hic
22
bedpe bed3+
8
csv
bed bed3
4
hdf5
4
tar
3
bed bedgraph
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Organ
connective tissue
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
files.file_type!
bed bed3
organ_slims!
connective tissue
spinal cord
BIOSAMPLE
ASSAY
5 results
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ATAC-seq
pCHi-C
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
neuron cell of Hypothalamus (neuron)
1
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