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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
7
ATAC-seq
2
pCHi-C
Assay category
7
DNA accessibility
Date released
4
February, 2021
3
February, 2023
2
March, 2020
Available data
3389
bam
3166
bigWig
1817
bed narrowPeak
1597
tsv
1354
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
hic
22
bedpe bed3+
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
9
Homo sapiens
Biosample type
9
in vitro differentiated cells
Organ
4
connective tissue
Project
9
AMP
Genome assembly (visualization)
9
hg19
Lab
6
AMP-T2D consortium
3
Struan F.A. Grant, CHOP
Audit category:
3
inconsistent ontology term
lab.title!
Xin Sun, UCSD
month_released!
August, 2018
BIOSAMPLE
ASSAY
9 results
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ATAC-seq
pCHi-C
in vitro differentiated cells
adipocyte
4
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
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