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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
2
pCHi-C
Assay category
3
DNA accessibility
Date released
February, 2021
3
February, 2023
2
March, 2020
Available data
2784
bam
2589
bigWig
1780
bed narrowPeak
1286
fastq
1042
bigBed narrowPeak
1027
tsv
390
tagAlign
322
bed broadPeak
285
bigBed broadPeak
268
bed bed3+
153
zippedFastqFolder
72
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
10
bed bed3
5
hdf5
4
tar
3
bed bedgraph
3
cool
2
csv
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
5
Homo sapiens
Biosample type
5
in vitro differentiated cells
Project
5
AMP
Genome assembly (visualization)
5
hg19
Lab
3
Struan F.A. Grant, CHOP
2
AMP-T2D consortium
Audit category:
3
inconsistent ontology term
month_released!
February, 2021
organ_slims!
embryo
BIOSAMPLE
ASSAY
5 results
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ATAC-seq
pCHi-C
in vitro differentiated cells
Progenitor cell of Hypothalamus (neural progenitor cell)
1
cardiomyocytes (cardiac muscle cell)
1
embryonic stem cell
1
lymphocyte of B lineage (iPSC)
1
neuron cell of Hypothalamus (neuron)
1
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