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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
4
ChIP-seq
2
ATAC-seq
Assay category
4
DNA binding
2
DNA accessibility
Target of assay
4
transcription factor
2
histone
histone modification
1
broad histone mark
1
narrow histone mark
Date released
4
November, 2017
1
March, 2019
1
October, 2017
Available data
2333
bam
2053
bigWig
1368
tsv
1076
fastq
bed narrowPeak
637
bigBed narrowPeak
247
bed broadPeak
245
bigBed broadPeak
237
bed bed3+
161
txt
153
zippedFastqFolder
71
tagAlign
64
xls
35
bed bedMethyl
35
bigBed bedMethyl
21
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
3
cool
3
hdf5
3
tar
2
ibed
1
bedpe
1
vcf
Organism
6
Homo sapiens
Biosample type
4
cell line
2
tissue
Organ
4
liver
2
pancreas
Project
6
AMP
Genome assembly (visualization)
5
hg19
1
GRCh38
Lab
4
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bed narrowPeak
month_released!
July, 2018
organ_slims!
blood vessel
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
6 results
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ChIP-seq
ATAC-seq
cell line
HepG2
4
tissue
islet of Langerhans
2
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