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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
21
ChIP-seq
2
ATAC-seq
Assay category
21
DNA binding
2
DNA accessibility
Target of assay
21
histone
21
histone modification
12
broad histone mark
9
narrow histone mark
Date released
20
August, 2017
1
March, 2019
1
November, 2017
1
October, 2017
Available data
3392
bam
3169
bigWig
1817
bed narrowPeak
1599
tsv
1358
fastq
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
bigBed broadPeak
273
bed bed3+
161
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
23
Homo sapiens
Biosample type
23
tissue
Organ
13
musculature of body
8
pancreas
1
adipose tissue
1
brain
1
connective tissue
Project
23
AMP
Genome assembly (visualization)
22
hg19
1
GRCh38
Lab
21
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bigBed broadPeak
bigBed narrowPeak
ibed
organ_slims!
thymus
BIOSAMPLE
ASSAY
23 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
2
cingulate gyrus
1
subcutaneous abdominal adipose tissue
1
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