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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
2
ATAC-seq
Assay category
14
DNA binding
2
DNA accessibility
Target of assay
22
histone
22
histone modification
14
broad histone mark
narrow histone mark
Date released
12
August, 2017
November, 2017
2
October, 2019
1
March, 2019
1
October, 2017
Available data
2624
bam
2415
bigWig
1594
tsv
1104
bed narrowPeak
765
fastq
bigBed narrowPeak
260
bed bed3+
236
bed broadPeak
216
bigBed broadPeak
172
tagAlign
161
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
20
bedpe bed3+
20
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
2
ibed
1
bedpe
1
tar
1
vcf
Organism
16
Homo sapiens
Biosample type
14
tissue
2
primary cell
Organ
8
musculature of body
6
pancreas
2
blood vessel
2
epithelium
2
vasculature
2
vein
Project
16
AMP
Genome assembly (visualization)
15
hg19
1
GRCh38
Lab
14
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
files.file_type!
bigBed narrowPeak
lab.title!
Klaus Kaestner, Upenn
month_released!
November, 2017
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
skeletal muscle tissue
8
islet of Langerhans
4
2
primary cell
endothelial cell of umbilical vein
2
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