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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
ATAC-seq
4
DNase-seq
2
ChIP-seq
1
FAIRE-seq
Assay category
10
DNA accessibility
2
DNA binding
Target of assay
histone
44
histone modification
26
broad histone mark
18
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
243
November, 2017
191
June, 2019
73
November, 2018
33
December, 2017
30
December, 2018
15
October, 2018
14
January, 2019
14
September, 2018
12
August, 2017
12
October, 2019
5
April, 2019
5
May, 2019
5
September, 2017
2
July, 2019
1
March, 2019
1
November, 2020
1
October, 2017
Available data
184
fastq
179
bam
150
bigWig
89
tsv
35
bed narrowPeak
21
bed bed3+
12
bigBed narrowPeak
10
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bed broadPeak
4
bigBed broadPeak
Organism
12
Homo sapiens
Biosample type
7
primary cell
4
tissue
1
in vitro differentiated cells
Organ
5
pancreas
3
epithelium
2
connective tissue
1
adipose tissue
1
liver
Project
12
AMP
Genome assembly (visualization)
12
hg19
8
GRCh38
Lab
12
AMP-T2D consortium
target.investigated_as!
histone
BIOSAMPLE
ASSAY
12 results
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Clear Filters
ATAC-seq
DNase-seq
ChIP-seq
FAIRE-seq
primary cell
skeletal muscle myoblast
2
2
pancreatic acinar cell
1
pancreatic alpha cell
1
pancreatic beta cell
1
tissue
islet of Langerhans
1
1
right lobe of liver
1
subcutaneous adipose tissue
1
in vitro differentiated cells
adipocyte
1
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