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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
16
DNase-seq
11
ChIP-seq
Assay category
16
DNA accessibility
11
DNA binding
Target of assay
8
histone
8
histone modification
5
narrow histone mark
3
broad histone mark
3
transcription factor
RNA binding protein
2
control
Date released
14
June, 2019
4
August, 2021
4
October, 2019
3
May, 2021
2
November, 2017
Available data
283
bam
267
bigWig
247
fastq
143
bed narrowPeak
124
tsv
80
zippedFastqFolder
69
bigBed narrowPeak
21
bed bed3+
20
bed broadPeak
20
bigBed broadPeak
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
6
hic
5
bedpe bed3+
3
cool
2
hdf5
1
tar
Organism
27
Homo sapiens
Biosample type
24
primary cell
3
in vitro differentiated cells
Organ
153
brain
134
liver
78
kidney
48
musculature of body
36
limb
31
connective tissue
30
heart
28
pancreas
27
epithelium
18
ureter
15
vasculature
12
blood vessel
10
adipose tissue
4
artery
4
eye
4
vein
2
nerve
1
pituitary gland
1
spleen
Project
27
AMP
Genome assembly (visualization)
23
GRCh38
19
hg19
Lab
27
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2021
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
27 results
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DNase-seq
ChIP-seq
primary cell
hepatocyte
1
4
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
1
choroid plexus epithelial cell
1
1
glomerular visceral epithelial cell
2
+ See 8 more…
in vitro differentiated cells
pancreatic PP cell
3
See all biosamples
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