Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
397
total RNA-seq
3
small RNA-seq
1
ChIP-seq
1
DNase-seq
1
pCHi-C
Assay category
400
Transcription
1
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
386
February, 2021
12
July, 2019
2
February, 2020
1
August, 2017
1
June, 2019
1
March, 2020
Available data
442
bam
425
bigWig
401
tsv
fastq
13
bed narrowPeak
10
bigBed narrowPeak
8
tagAlign
6
bed bed3+
3
bed broadPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
bigBed broadPeak
1
bedpe bed3+
Organism
403
Homo sapiens
Biosample type
401
tissue
2
primary cell
Organ
483
connective tissue
403
adipose tissue
228
pancreas
198
heart
171
liver
102
kidney
81
vasculature
79
blood vessel
74
epithelium
62
artery
62
brain
58
bone element
55
musculature of body
43
limb
18
ureter
10
embryo
9
eye
7
nerve
4
vein
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
pericardium
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
403
AMP
Genome assembly (visualization)
400
hg19
399
GRCh38
Lab
403
AMP-T2D consortium
files.file_type!
fastq
BIOSAMPLE
ASSAY
403 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
small RNA-seq
ChIP-seq
DNase-seq
pCHi-C
tissue
adipose tissue
381
1
subcutaneous adipose tissue
7
1
omental fat pad
5
1
1
visceral abdominal adipose tissue
3
subcutaneous abdominal adipose tissue
1
primary cell
mesenchymal stem cell of adipose
1
1
Download