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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
109
total RNA-seq
39
ChIP-seq
2
DNase-seq
Assay category
109
Transcription
39
DNA binding
2
DNA accessibility
Target of assay
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
559
February, 2021
189
May, 2020
187
June, 2019
173
May, 2021
164
July, 2018
130
August, 2017
123
August, 2021
70
November, 2017
65
July, 2019
49
April, 2018
45
March, 2020
26
September, 2018
25
February, 2020
25
October, 2019
20
November, 2019
16
February, 2023
15
February, 2018
9
December, 2019
9
November, 2018
5
January, 2019
5
November, 2020
4
October, 2017
3
August, 2018
3
June, 2018
2
October, 2018
1
March, 2019
Available data
341
bam
303
bigWig
287
fastq
179
bed narrowPeak
109
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
33
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
2
bedpe bed3+
2
hic
Organism
144
Homo sapiens
Biosample type
134
tissue
14
primary cell
1
cell line
1
in vitro differentiated cells
Organ
121
pancreas
13
musculature of body
2
connective tissue
1
adipose tissue
1
epithelium
Project
150
AMP
Genome assembly (visualization)
150
hg19
128
GRCh38
Lab
150
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
Audit category:
2
inconsistent assembly
BIOSAMPLE
ASSAY
150 results
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Clear Filters
total RNA-seq
ChIP-seq
DNase-seq
tissue
islet of Langerhans
108
6
skeletal muscle tissue
13
pancreas
6
subcutaneous abdominal adipose tissue
1
primary cell
skeletal muscle myoblast
13
1
cell line
EndoC_BH1
1
in vitro differentiated cells
adipocyte
1
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