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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
66
ATAC-seq
29
ChIP-seq
Assay category
66
DNA accessibility
29
DNA binding
Target of assay
29
histone
29
histone modification
16
broad histone mark
13
narrow histone mark
Date released
64
August, 2021
20
August, 2017
6
November, 2017
4
October, 2017
1
March, 2019
Available data
3385
bam
3163
bigWig
1811
bed narrowPeak
1600
tsv
1351
fastq
1036
bigBed narrowPeak
391
tagAlign
316
bed broadPeak
bigBed broadPeak
273
bed bed3+
160
txt
153
zippedFastqFolder
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
95
Homo sapiens
Biosample type
95
tissue
Organ
64
kidney
13
musculature of body
9
brain
8
pancreas
1
adipose tissue
1
connective tissue
Project
95
AMP
Genome assembly (visualization)
73
GRCh38
30
hg19
Lab
64
Katalin Susztak, Upenn
29
AMP-T2D consortium
1
Mark McCarthy, Oxford
1
Stephen Parker, UMich
Audit category:
2
missing controlled_by
files.file_type!
bigBed broadPeak
month_released!
August, 2022
BIOSAMPLE
ASSAY
95 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
skeletal muscle tissue
13
islet of Langerhans
2
6
brain
3
cingulate gyrus
2
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