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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
9
DNase-seq
1
ChIP-seq
Assay category
9
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
6
June, 2019
2
August, 2017
1
November, 2018
1
November, 2020
Available data
592
bam
567
bigWig
476
tsv
101
fastq
74
bed narrowPeak
27
bed bed3+
25
bigBed narrowPeak
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
10
Homo sapiens
Biosample type
6
primary cell
3
tissue
1
in vitro differentiated cells
Organ
78
kidney
63
liver
47
brain
46
musculature of body
32
limb
30
heart
20
pancreas
18
epithelium
18
ureter
11
vasculature
10
connective tissue
7
blood vessel
4
eye
3
adipose tissue
2
artery
1
spleen
Project
10
AMP
Genome assembly (visualization)
9
GRCh38
9
hg19
Lab
10
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
February, 2020
November, 2019
October, 2019
BIOSAMPLE
ASSAY
10 results
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DNase-seq
ChIP-seq
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
tissue
omental fat pad
2
subcutaneous abdominal adipose tissue
1
in vitro differentiated cells
adipocyte
1
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