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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
DNase-seq
1
ChIP-seq
Assay category
13
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
8
June, 2019
2
August, 2017
2
October, 2019
1
November, 2018
1
November, 2020
Available data
693
bam
653
bigWig
534
tsv
149
bed narrowPeak
99
fastq
53
bigBed narrowPeak
31
bed bed3+
28
tagAlign
14
bed broadPeak
13
bigBed broadPeak
6
bed bed3
4
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
14
Homo sapiens
Biosample type
7
tissue
6
primary cell
1
in vitro differentiated cells
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
14
AMP
Genome assembly (visualization)
13
GRCh38
13
hg19
Lab
14
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
month_released!
July, 2018
BIOSAMPLE
ASSAY
14 results
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DNase-seq
ChIP-seq
tissue
coronary artery
2
omental fat pad
2
tibial artery
2
subcutaneous abdominal adipose tissue
1
primary cell
cardiac fibroblast
3
brain pericyte
1
hepatic stellate cell
1
osteoblast
1
in vitro differentiated cells
adipocyte
1
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