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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
59
ChIP-seq
Assay category
59
DNA binding
Target of assay
59
histone
59
histone modification
48
transcription factor
32
broad histone mark
27
narrow histone mark
8
RNA binding protein
5
chromatin remodeller
1
other context
1
other post-translational modification
Date released
37
August, 2017
22
November, 2017
October, 2017
Available data
795
bigWig
779
bed narrowPeak
708
bam
320
bigBed narrowPeak
309
tagAlign
221
fastq
59
bed broadPeak
27
bigBed broadPeak
25
bed bed3+
1
tagAlign bed3+
Organism
53
Homo sapiens
Biosample type
32
tissue
14
cell line
13
primary cell
Organ
14
liver
13
musculature of body
12
pancreas
9
brain
4
epithelium
4
vasculature
blood vessel
2
vein
1
adipose tissue
1
connective tissue
Project
59
AMP
Genome assembly (visualization)
59
hg19
36
GRCh38
Lab
59
AMP-T2D consortium
Audit category:
11
inconsistent control read length
2
inconsistent assembly
month_released!
October, 2017
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
59 results
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ChIP-seq
tissue
skeletal muscle tissue
13
islet of Langerhans
6
pancreas
6
cingulate gyrus
2
middle frontal area 46
2
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cell line
HepG2
14
primary cell
skeletal muscle myoblast
11
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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