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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
171
DNase-seq
39
ChIP-seq
Assay category
171
DNA accessibility
39
DNA binding
Target of assay
37
histone
37
histone modification
22
broad histone mark
15
narrow histone mark
2
RNA binding protein
2
transcription factor
1
chromatin remodeller
Date released
169
June, 2019
70
November, 2017
41
August, 2017
9
November, 2018
9
October, 2019
4
October, 2017
1
March, 2019
1
November, 2020
Available data
482
bam
464
bigWig
334
bed narrowPeak
287
fastq
234
bigBed narrowPeak
210
bed broadPeak
202
bed bed3+
184
bigBed broadPeak
89
tsv
85
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
Organism
204
Homo sapiens
Biosample type
171
tissue
38
primary cell
1
in vitro differentiated cells
Organ
78
kidney
46
musculature of body
32
limb
30
brain
30
heart
ureter
16
pancreas
14
epithelium
8
connective tissue
7
vasculature
5
blood vessel
4
eye
2
adipose tissue
2
artery
2
liver
Project
210
AMP
Genome assembly (visualization)
188
GRCh38
187
hg19
Lab
210
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
2
inconsistent assembly
organ_slims!
ureter
BIOSAMPLE
ASSAY
210 results
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Clear Filters
DNase-seq
ChIP-seq
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
skeletal muscle tissue
13
+ See 34 more…
primary cell
skeletal muscle myoblast
1
13
cardiac fibroblast
3
glomerular visceral epithelial cell
2
kidney tubule cell
2
astrocyte of the cerebellum
1
+ See 16 more…
in vitro differentiated cells
adipocyte
1
See all biosamples
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