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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 39ChIP-seq
  • 2DNase-seq
Assay category
  • 39DNA binding
  • 2DNA accessibility
Target of assay
  • 37histone
  • 37histone modification
  • 22broad histone mark
  • 15narrow histone mark
  • 2RNA binding protein
  • 2transcription factor
  • 1chromatin remodeller
Date released
  • 187June, 2019
  • 70November, 2017
  • 41August, 2017
  • 9November, 2018
  • 9October, 2019
  • 4October, 2017
  • 1March, 2019
  • 1November, 2020
Available data
  • 287fastq
  • 282bam
  • 272bigWig
  • 142bed narrowPeak
  • 89tsv
  • 85tagAlign
  • 42bigBed narrowPeak
  • 41bed broadPeak
  • 33bed bed3+
  • 15bigBed broadPeak
  • 6bed bedMethyl
  • 6bigBed bedMethyl
Organism
  • 35Homo sapiens
Biosample type
  • 26tissue
  • 14primary cell
  • 1in vitro differentiated cells
Organ
  • 13musculature of body
  • 12pancreas
  • 2connective tissue
  • 1adipose tissue
Project
  • 41AMP
Genome assembly (visualization)
  • 41hg19
  • 19GRCh38
Lab
  • 41AMP-T2D consortium
Audit category:
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

41 results

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Clear Filters
ChIP-seq
DNase-seq
tissue
skeletal muscle tissue13
islet of Langerhans6
pancreas6
subcutaneous abdominal adipose tissue1
primary cell
skeletal muscle myoblast131
in vitro differentiated cells
adipocyte1
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