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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
46
ChIP-seq
Assay category
46
DNA binding
Target of assay
46
transcription factor
22
histone
histone modification
12
narrow histone mark
10
broad histone mark
6
RNA binding protein
4
chromatin remodeller
1
other context
1
other post-translational modification
Date released
182
June, 2019
46
November, 2017
9
November, 2018
4
August, 2017
3
October, 2019
1
March, 2019
1
November, 2020
1
October, 2017
Available data
315
bam
304
fastq
257
bigWig
238
bed narrowPeak
238
bigBed narrowPeak
46
bed broadPeak
46
bigBed broadPeak
11
tagAlign
3
tar
Organism
46
Homo sapiens
Biosample type
44
cell line
2
primary cell
Organ
44
liver
3
brain
2
epithelium
2
vasculature
blood vessel
Project
46
AMP
Genome assembly (visualization)
46
hg19
34
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
2
inconsistent control read length
organ_slims!
blood vessel
pericardium
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
46 results
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ChIP-seq
cell line
HepG2
44
primary cell
astrocyte of the cerebellum
1
choroid plexus epithelial cell
1
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