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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
13
DNase-seq
3
ChIP-seq
Assay category
13
DNA accessibility
3
DNA binding
Target of assay
3
histone
3
histone modification
2
broad histone mark
1
RNA binding protein
1
narrow histone mark
transcription factor
Date released
9
June, 2019
6
October, 2019
1
November, 2017
Available data
178
bam
153
bed narrowPeak
147
bigWig
80
bigBed narrowPeak
73
tsv
16
bed broadPeak
16
bigBed broadPeak
15
bed bed3+
3
hic
2
bed bedMethyl
2
bedpe bed3+
2
bigBed bedMethyl
2
fastq
2
hdf5
2
tagAlign
1
tar
Organism
16
Homo sapiens
Biosample type
8
primary cell
8
tissue
Organ
78
kidney
46
musculature of body
44
brain
36
limb
30
heart
21
pancreas
20
epithelium
19
liver
18
ureter
15
vasculature
12
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
16
AMP
Genome assembly (visualization)
15
hg19
14
GRCh38
Lab
16
AMP-T2D consortium
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
16 results
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DNase-seq
ChIP-seq
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
1
kidney capillary endothelial cell
1
retinal pigment epithelial cell
1
tissue
retina
3
coronary artery
2
tibial artery
2
ascending aorta
1
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