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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
30
DNase-seq
1
ChIP-seq
Assay category
30
DNA accessibility
1
DNA binding
Target of assay
histone
10
histone modification
6
narrow histone mark
4
broad histone mark
1
RNA binding protein
1
transcription factor
Date released
28
June, 2019
2
November, 2018
1
November, 2017
Available data
71
bam
49
bigWig
32
bed bed3+
32
bed narrowPeak
32
bigBed narrowPeak
31
bed broadPeak
31
bigBed broadPeak
26
tsv
19
tagAlign
7
fastq
2
hdf5
1
bed bed3
1
bed bedMethyl
1
bigBed bedMethyl
Organism
31
Homo sapiens
Biosample type
27
tissue
4
primary cell
Organ
78
kidney
49
liver
36
limb
35
brain
33
musculature of body
30
heart
18
epithelium
18
ureter
vasculature
10
blood vessel
9
connective tissue
9
pancreas
4
artery
4
eye
2
adipose tissue
2
nerve
2
vein
1
spleen
Project
31
AMP
Genome assembly (visualization)
31
GRCh38
21
hg19
Lab
31
AMP-T2D consortium
organ_slims!
vasculature
target.investigated_as!
histone
nucleotide modification
BIOSAMPLE
ASSAY
31 results
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DNase-seq
ChIP-seq
tissue
brain
14
frontal cortex
2
Ammon's horn
1
caudate nucleus
1
cerebellar cortex
1
+ See 8 more…
primary cell
astrocyte of the cerebellum
1
1
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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