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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
11
ChIP-seq
Assay category
32
DNA accessibility
11
DNA binding
Target of assay
12
histone
12
histone modification
8
narrow histone mark
broad histone mark
3
RNA binding protein
3
transcription factor
Date released
30
June, 2019
10
November, 2017
2
November, 2018
1
October, 2017
Available data
183
bam
163
bigWig
142
bed narrowPeak
73
tagAlign
69
bigBed narrowPeak
43
bed broadPeak
38
bigBed broadPeak
35
bed bed3+
27
tsv
15
fastq
3
bed bedMethyl
3
bigBed bedMethyl
3
hdf5
1
bed bed3
1
tagAlign bed3+
Organism
43
Homo sapiens
Biosample type
32
tissue
11
primary cell
Organ
78
kidney
51
liver
43
brain
38
musculature of body
36
limb
30
heart
20
epithelium
18
ureter
15
vasculature
13
pancreas
11
blood vessel
10
connective tissue
4
artery
4
eye
3
adipose tissue
2
nerve
2
vein
1
spleen
0
pericardium
Project
43
AMP
Genome assembly (visualization)
42
GRCh38
33
hg19
Lab
43
AMP-T2D consortium
Audit category:
1
missing controlled_by
target.investigated_as!
broad histone mark
chromatin remodeller
BIOSAMPLE
ASSAY
43 results
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DNase-seq
ChIP-seq
tissue
brain
14
1
caudate nucleus
1
1
frontal cortex
2
Ammon's horn
1
cerebellar cortex
1
+ See 11 more…
primary cell
astrocyte of the cerebellum
1
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
astrocyte of the hippocampus
1
brain pericyte
1
See all biosamples
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