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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32DNase-seq
  • 15ChIP-seq
Assay category
  • 32DNA accessibility
  • 15DNA binding
Target of assay
  • 12histone
  • 12histone modification
  • 8narrow histone mark
  • 4broad histone mark
  • 3RNA binding protein
  • 3transcription factor
Date released
  • 30June, 2019
  • 12November, 2017
  • 3October, 2017
  • 2November, 2018
Available data
  • 243bam
  • 222bigWig
  • 203bed narrowPeak
  • 127bigBed narrowPeak
  • 118tagAlign
  • 47bed broadPeak
  • 38bigBed broadPeak
  • 35bed bed3+
  • 26tsv
  • 21fastq
  • 3hdf5
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 1bed bed3
  • 1tagAlign bed3+
Organism
  • 47Homo sapiens
Biosample type
  • 36tissue
  • 11primary cell
Organ
  • 78kidney
  • 63liver
  • 47brain
  • 46musculature of body
  • 36limb
  • 30heart
  • 22epithelium
  • 21pancreas
  • 18ureter
  • 17vasculature
  • 13blood vessel
  • 10connective tissue
  • 4artery
  • 4eye
  • 4vein
  • 3adipose tissue
  • 2nerve
  • 1spleen
Project
  • 47AMP
Genome assembly (visualization)
  • 46GRCh38
  • 37hg19
Lab
  • 47AMP-T2D consortium
Audit category:
  • 2missing controlled_by
BIOSAMPLE
ASSAY

47 results

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Clear Filters
DNase-seq
ChIP-seq
tissue
brain143
caudate nucleus11
cingulate gyrus2
frontal cortex2
middle frontal area 462
primary cell
astrocyte of the cerebellum12
brain microvascular endothelial cell12
choroid plexus epithelial cell12
astrocyte of the hippocampus1
brain pericyte1
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