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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 9DNase-seq
  • 1ChIP-seq
Assay category
  • 9DNA accessibility
  • 1DNA binding
Target of assay
  • 1histone
  • 1histone modification
  • 1narrow histone mark
Date released
  • 6June, 2019
  • 2August, 2017
  • 1November, 2018
  • 1November, 2020
Available data
  • 593bam
  • 570bigWig
  • 478tsv
  • 101fastq
  • 75bed narrowPeak
  • 28bigBed narrowPeak
  • 27bed bed3+
  • 22tagAlign
  • 10bed broadPeak
  • 9bigBed broadPeak
  • 6bed bed3
  • 4bed bedgraph
  • 3bed bedMethyl
  • 3bigBed bedMethyl
  • 1bedpe bed3+
  • 1hdf5
Organism
  • 10Homo sapiens
Biosample type
  • 6primary cell
  • 3tissue
  • 1in vitro differentiated cells
Organ
  • 78kidney
  • 63liver
  • 47brain
  • 46musculature of body
  • 36limb
  • 30heart
  • 22epithelium
  • 21pancreas
  • 18ureter
  • 17vasculature
  • 13blood vessel
  • 10connective tissue
  • 4artery
  • 4eye
  • 4vein
  • 3adipose tissue
  • 2nerve
  • 1spleen
Project
  • 10AMP
Genome assembly (visualization)
  • 9GRCh38
  • 9hg19
Lab
  • 10AMP-T2D consortium
Audit category:
  • 1inconsistent ontology term
BIOSAMPLE
ASSAY

10 results

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DNase-seq
ChIP-seq
primary cell
cardiac fibroblast3
brain pericyte1
hepatic stellate cell1
osteoblast1
tissue
omental fat pad2
subcutaneous abdominal adipose tissue1
in vitro differentiated cells
adipocyte1
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