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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
DNase-seq
2
ChIP-seq
Assay category
82
DNA accessibility
2
DNA binding
Target of assay
2
broad histone mark
2
histone
2
histone modification
Date released
80
June, 2019
4
October, 2019
Available data
420
bam
393
bigWig
305
bed narrowPeak
251
fastq
172
tsv
157
bigBed narrowPeak
86
bed bed3+
84
bed broadPeak
84
bigBed broadPeak
80
zippedFastqFolder
64
xls
62
txt
7
hic
7
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
5
bedpe bed3+
5
csv
3
cool
1
hdf5
1
tar
Organism
84
Homo sapiens
Biosample type
68
tissue
16
primary cell
Organ
78
kidney
63
liver
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
84
AMP
Genome assembly (visualization)
82
GRCh38
77
hg19
Lab
84
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
brain
BIOSAMPLE
ASSAY
84 results
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DNase-seq
ChIP-seq
tissue
kidney
13
renal cortex interstitium
11
renal pelvis
10
right kidney
10
left kidney
9
+ See 4 more…
primary cell
endothelial cell of umbilical vein
2
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
glomerular endothelial cell
1
+ See 6 more…
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