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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
DNase-seq
6
ChIP-seq
Assay category
120
DNA accessibility
6
DNA binding
Target of assay
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
2
transcription factor
Date released
114
June, 2019
8
October, 2019
4
November, 2017
Available data
542
bam
493
bigWig
403
bed narrowPeak
257
fastq
247
bigBed narrowPeak
179
tsv
126
bed broadPeak
126
bigBed broadPeak
125
bed bed3+
80
zippedFastqFolder
64
xls
62
txt
8
bed bedMethyl
8
bigBed bedMethyl
7
hic
7
tagAlign
5
bedpe bed3+
5
csv
3
cool
2
hdf5
1
tar
Organism
126
Homo sapiens
Biosample type
104
tissue
22
primary cell
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
4
vein
3
adipose tissue
2
nerve
1
spleen
Project
126
AMP
Genome assembly (visualization)
124
GRCh38
119
hg19
Lab
126
AMP-T2D consortium
Audit category:
2
inconsistent ontology term
BIOSAMPLE
ASSAY
126 results
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DNase-seq
ChIP-seq
tissue
muscle of arm
17
kidney
13
muscle of leg
13
renal cortex interstitium
11
renal pelvis
10
+ See 10 more…
primary cell
endothelial cell of umbilical vein
2
2
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
+ See 8 more…
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