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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
32
DNase-seq
4
ChIP-seq
Assay category
32
DNA accessibility
4
DNA binding
Target of assay
2
RNA binding protein
2
histone
2
histone modification
2
narrow histone mark
2
transcription factor
Date released
32
June, 2019
4
November, 2017
Available data
316
bam
305
bigWig
257
fastq
157
bed narrowPeak
156
tsv
81
bigBed narrowPeak
80
zippedFastqFolder
37
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
8
tagAlign
6
bed bedMethyl
6
bigBed bedMethyl
4
bedpe bed3+
4
hic
3
cool
2
hdf5
Organism
36
Homo sapiens
Biosample type
18
primary cell
18
tissue
Organ
78
kidney
63
liver
47
brain
46
musculature of body
36
limb
30
heart
22
epithelium
21
pancreas
18
ureter
17
vasculature
13
blood vessel
10
connective tissue
4
artery
4
eye
vein
3
adipose tissue
2
nerve
1
spleen
0
pituitary gland
Project
36
AMP
Genome assembly (visualization)
36
GRCh38
30
hg19
Lab
36
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
organ_slims!
vein
BIOSAMPLE
ASSAY
36 results
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DNase-seq
ChIP-seq
primary cell
brain microvascular endothelial cell
1
2
choroid plexus epithelial cell
1
2
glomerular visceral epithelial cell
2
kidney tubule cell
2
epithelial cell of proximal tubule
1
+ See 7 more…
tissue
renal pelvis
10
left renal pelvis
4
right renal pelvis
4
See all biosamples
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