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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 36ChIP-seq
Assay category
  • 36DNA binding
Target of assay
  • 65histone
  • 65histone modification
  • 49transcription factor
  • 36broad histone mark
  • 29narrow histone mark
  • 9RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 22August, 2017
  • 10November, 2017
  • 2October, 2017
  • 2October, 2019
Available data
  • 427bigWig
  • 420bed narrowPeak
  • 378bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 32Homo sapiens
Biosample type
  • 20tissue
  • 8cell line
  • 8primary cell
Organ
  • 8liver
  • 8musculature of body
  • 8pancreas
  • 4brain
  • 2blood vessel
  • 2epithelium
  • 2vasculature
  • 2vein
Project
  • 36AMP
Genome assembly (visualization)
  • 36hg19
  • 21GRCh38
Lab
  • 36AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 6inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

36 results

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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue8
islet of Langerhans4
pancreas4
brain2
cingulate gyrus1
cell line
HepG28
primary cell
skeletal muscle myoblast6
endothelial cell of umbilical vein2
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