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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 65ChIP-seq
Assay category
  • 65DNA binding
Target of assay
  • 65histone
  • 65histone modification
  • 49transcription factor
  • 36broad histone mark
  • 29narrow histone mark
  • 9RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 37August, 2017
  • 23November, 2017
  • 3October, 2017
  • 2October, 2019
Available data
  • 869bigWig
  • 851bed narrowPeak
  • 785bam
  • 391bigBed narrowPeak
  • 321tagAlign
  • 230fastq
  • 65bed broadPeak
  • 30bigBed broadPeak
  • 25bed bed3+
  • 1tagAlign bed3+
Organism
  • 59Homo sapiens
Biosample type
  • 35tissue
  • 16primary cell
  • 14cell line
Organ
  • 14liver
  • 13musculature of body
  • 12brain
  • 12pancreas
  • 4epithelium
  • 4vasculature
  • 3blood vessel
  • 2vein
  • 1adipose tissue
  • 1connective tissue
Project
  • 65AMP
Genome assembly (visualization)
  • 65hg19
  • 40GRCh38
Lab
  • 65AMP-T2D consortium
Audit category:
  • 2missing controlled_by
Audit category:
  • 11inconsistent control read length
  • 2inconsistent assembly
BIOSAMPLE
ASSAY

65 results

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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue13
islet of Langerhans6
pancreas6
brain3
cingulate gyrus2
primary cell
skeletal muscle myoblast11
endothelial cell of umbilical vein2
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
cell line
HepG214
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