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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 29ChIP-seq
Assay category
  • 29DNA binding
Target of assay
  • 65histone
  • 65histone modification
  • 49transcription factor
  • 36broad histone mark
  • 29narrow histone mark
  • 9RNA binding protein
  • 5chromatin remodeller
  • 1other context
  • 1other post-translational modification
Date released
  • 15August, 2017
  • 13November, 2017
  • 1October, 2017
Available data
  • 440bigWig
  • 429bed narrowPeak
  • 405bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • 110fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 27Homo sapiens
Biosample type
  • 15tissue
  • 8primary cell
  • 6cell line
Organ
  • 8brain
  • 6liver
  • 5musculature of body
  • 4pancreas
  • 2epithelium
  • 2vasculature
  • 1adipose tissue
  • 1blood vessel
  • 1connective tissue
Project
  • 29AMP
Genome assembly (visualization)
  • 29hg19
  • 19GRCh38
Lab
  • 29AMP-T2D consortium
Audit category:
  • 1missing controlled_by
Audit category:
  • 5inconsistent control read length
BIOSAMPLE
ASSAY

29 results

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Clear Filters
ChIP-seq
tissue
skeletal muscle tissue5
islet of Langerhans2
pancreas2
brain1
caudate nucleus1
primary cell
skeletal muscle myoblast5
astrocyte of the cerebellum1
brain microvascular endothelial cell1
choroid plexus epithelial cell1
cell line
HepG26
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