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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
3
ATAC-seq
1
ChIP-seq
Assay category
3
DNA accessibility
1
DNA binding
Target of assay
1
histone
1
histone modification
1
narrow histone mark
Date released
2
August, 2021
1
August, 2017
1
February, 2023
Available data
bam
570
bigWig
478
tsv
101
fastq
75
bed narrowPeak
28
bigBed narrowPeak
27
bed bed3+
22
tagAlign
10
bed broadPeak
9
bigBed broadPeak
6
bed bed3
bed bedgraph
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
1
hdf5
Organism
4
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
tissue
Organ
76
heart
64
kidney
35
artery
35
blood vessel
35
vasculature
34
liver
27
eye
13
musculature of body
12
epithelium
6
pancreas
4
connective tissue
2
adipose tissue
1
brain
Project
4
AMP
Genome assembly (visualization)
4
hg19
Lab
2
AMP-T2D consortium
2
Struan F.A. Grant, CHOP
files.file_type!
bam
bed bedgraph
BIOSAMPLE
ASSAY
4 results
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ATAC-seq
ChIP-seq
in vitro differentiated cells
adipocyte
1
osteoblast
1
tissue
adipose tissue
1
subcutaneous abdominal adipose tissue
1
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