Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
131
ATAC-seq
92
ChIP-seq
Assay category
131
DNA accessibility
92
DNA binding
Target of assay
87
histone
87
histone modification
52
broad histone mark
35
narrow histone mark
5
RNA binding protein
5
transcription factor
Date released
66
August, 2021
65
February, 2023
40
May, 2024
30
May, 2021
20
August, 2017
1
April, 2019
1
November, 2017
Available data
bam
2547
bigWig
1425
tsv
1376
bed narrowPeak
893
fastq
684
bigBed narrowPeak
312
tagAlign
260
bed bed3+
259
bed broadPeak
222
bigBed broadPeak
161
txt
153
zippedFastqFolder
64
xls
33
bed bedMethyl
33
bigBed bedMethyl
21
bedpe bed3+
21
hic
11
bed bed3
7
bed bedgraph
7
csv
4
hdf5
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
tar
Organism
223
Homo sapiens
Biosample type
189
tissue
30
primary cell
4
in vitro differentiated cells
Organ
76
heart
64
kidney
35
artery
35
blood vessel
35
vasculature
liver
27
eye
13
musculature of body
12
epithelium
6
pancreas
4
connective tissue
2
adipose tissue
1
brain
Project
223
AMP
Genome assembly (visualization)
139
GRCh38
84
hg19
Lab
85
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
30
Kyle Gaulton, UCSD
4
Struan F.A. Grant, CHOP
Audit category:
1
inconsistent ontology term
files.file_type!
bam
month_released!
April, 2020
organ_slims!
gonad
liver
BIOSAMPLE
ASSAY
223 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
tissue
kidney
64
left cardiac atrium
40
coronary artery
35
retina
15
skeletal muscle tissue
13
+ See 6 more…
primary cell
CD8-positive, alpha-beta T cell
30
in vitro differentiated cells
adipocyte
1
embryonic stem cell
1
neuron cell of Hypothalamus (neuron)
1
osteoblast
1
See all biosamples
Download