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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
1
DNase-seq
1
FAIRE-seq
Assay category
39
DNA binding
2
DNA accessibility
Target of assay
30
histone
30
histone modification
15
broad histone mark
15
narrow histone mark
9
transcription factor
7
recombinant protein
2
RNA binding protein
Date released
18
April, 2019
16
October, 2019
4
May, 2019
2
June, 2019
1
July, 2019
Available data
183
bed narrowPeak
144
bam
131
bigWig
104
bigBed narrowPeak
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
xls
62
txt
24
tsv
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
41
Homo sapiens
Biosample type
21
tissue
12
primary cell
8
cell line
Organ
431
liver
192
pancreas
171
brain
161
heart
127
epithelium
122
vasculature
120
blood vessel
70
artery
61
connective tissue
56
limb
54
blood
54
bodily fluid
41
kidney
29
eye
27
musculature of body
25
nerve
13
spleen
12
embryo
11
adipose tissue
11
vein
8
bone element
8
skeleton
1
pituitary gland
Project
41
AMP
Genome assembly (visualization)
41
hg19
40
GRCh38
Lab
41
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
files.file_type!
bed bed3+
xls
month_released!
September, 2017
BIOSAMPLE
ASSAY
41 results
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Clear Filters
ChIP-seq
DNase-seq
FAIRE-seq
tissue
kidney
20
1
primary cell
epithelial cell of proximal tubule
8
kidney epithelial cell
4
cell line
RCC 7860 HIF1a re-expression
3
RCC 7860 HIF2a over-expression
2
RCC 7860 vector
2
glomerular visceral epithelial cell
1
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