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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
114
ChIP-seq
47
ATAC-seq
Assay category
114
DNA binding
47
DNA accessibility
Target of assay
97
histone
97
histone modification
57
broad histone mark
40
narrow histone mark
17
transcription factor
11
RNA binding protein
Date released
47
April, 2019
40
May, 2024
35
February, 2023
15
May, 2019
12
February, 2021
5
October, 2019
4
July, 2019
3
June, 2019
Available data
224
bigWig
211
bam
191
bed narrowPeak
168
tsv
94
bigBed narrowPeak
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
161
Homo sapiens
Biosample type
146
tissue
12
cell line
3
primary cell
Organ
431
liver
197
pancreas
171
brain
161
heart
132
epithelium
122
vasculature
120
blood vessel
105
kidney
70
artery
61
connective tissue
56
limb
54
blood
54
bodily fluid
29
eye
27
musculature of body
25
nerve
spleen
12
embryo
11
adipose tissue
11
vein
8
bone element
8
skeleton
1
pituitary gland
Project
161
AMP
Genome assembly (visualization)
160
GRCh38
86
hg19
Lab
121
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
3
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
spleen
BIOSAMPLE
ASSAY
161 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
left cardiac atrium
40
coronary artery
3
36
heart left ventricle
29
2
heart
12
heart right ventricle
11
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
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