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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
56
ChIP-seq
27
ATAC-seq
Assay category
56
DNA binding
27
DNA accessibility
Target of assay
52
transcription factor
11
RNA binding protein
10
chromatin remodeller
2
histone
2
histone modification
2
narrow histone mark
Date released
27
December, 2018
27
February, 2023
15
January, 2019
12
November, 2018
2
June, 2019
Available data
87
bed narrowPeak
67
bam
61
bigWig
60
bigBed narrowPeak
60
fastq
5
tsv
4
bed bed3+
4
bed broadPeak
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
83
Homo sapiens
Biosample type
54
cell line
27
tissue
2
primary cell
Organ
384
liver
207
pancreas
165
brain
161
heart
131
epithelium
blood vessel
118
vasculature
105
kidney
70
artery
66
connective tissue
56
limb
54
blood
54
bodily fluid
29
eye
27
musculature of body
25
nerve
14
embryo
13
spleen
11
adipose tissue
11
vein
8
bone element
8
skeleton
1
pituitary gland
Project
83
AMP
Genome assembly (visualization)
83
hg19
56
GRCh38
Lab
83
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bigBed broadPeak
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
83 results
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Clear Filters
ChIP-seq
ATAC-seq
cell line
GM12878
54
tissue
retina
15
pigmented layer of retina
12
primary cell
retinal pigment epithelial cell
2
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