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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
38
ATAC-seq
22
ChIP-seq
Assay category
38
DNA accessibility
22
DNA binding
Target of assay
13
histone
13
histone modification
9
transcription factor
8
narrow histone mark
5
broad histone mark
Date released
133
May, 2021
122
October, 2019
106
August, 2021
100
August, 2017
65
February, 2023
40
May, 2024
38
May, 2022
37
November, 2019
32
September, 2018
27
May, 2020
23
February, 2021
22
December, 2017
16
February, 2018
6
October, 2017
5
July, 2019
3
March, 2020
April, 2019
1
November, 2017
1
November, 2020
Available data
134
zippedFastqFolder
118
bam
118
fastq
110
bed narrowPeak
92
bigWig
bigBed narrowPeak
16
bed bed3+
7
txt
Organism
60
Homo sapiens
Biosample type
38
tissue
20
in vitro differentiated cells
2
stem cell
Organ
20
liver
18
pancreas
8
embryo
2
epithelium
Project
60
AMP
Genome assembly (visualization)
60
hg19
22
GRCh38
Lab
22
AMP-T2D consortium
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
Audit category:
11
inconsistent control read length
files.file_type!
bigBed narrowPeak
month_released!
April, 2019
BIOSAMPLE
ASSAY
60 results
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Clear Filters
ATAC-seq
ChIP-seq
tissue
liver
20
islet of Langerhans
18
in vitro differentiated cells
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
Hepatic endoderm
2
stem cell
hESC
2
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