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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
258
ChIP-seq
Assay category
258
DNA binding
Target of assay
236
transcription factor
66
recombinant protein
35
RNA binding protein
19
histone
19
histone modification
15
chromatin remodeller
10
narrow histone mark
9
broad histone mark
2
other context
2
other post-translational modification
Date released
258
November, 2017
210
June, 2019
149
October, 2019
105
August, 2017
97
May, 2019
90
August, 2021
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
44
May, 2021
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
21
January, 2019
18
February, 2021
16
February, 2018
7
July, 2019
6
October, 2017
5
September, 2017
March, 2020
2
November, 2020
Available data
392
bam
334
bigWig
324
fastq
313
bed narrowPeak
312
bigBed narrowPeak
tagAlign
70
bed broadPeak
64
bigBed broadPeak
3
tar
Organism
258
Homo sapiens
Biosample type
240
cell line
12
tissue
6
primary cell
Organ
240
liver
18
brain
4
epithelium
4
vasculature
2
blood vessel
Project
258
AMP
Genome assembly (visualization)
244
hg19
226
GRCh38
Lab
258
AMP-T2D consortium
Audit category:
10
missing controlled_by
Audit category:
10
inconsistent control read length
4
inconsistent control run_type
files.file_type!
tagAlign
month_released!
March, 2020
BIOSAMPLE
ASSAY
258 results
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Clear Filters
ChIP-seq
cell line
HepG2
240
tissue
layer of hippocampus
6
middle frontal area 46
5
cerebellum (Hemisphere)
1
primary cell
astrocyte of the cerebellum
2
brain microvascular endothelial cell
2
choroid plexus epithelial cell
2
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