Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
67
ChIP-seq
47
ATAC-seq
30
DNase-seq
Assay category
77
DNA accessibility
67
DNA binding
Target of assay
55
histone
55
histone modification
30
broad histone mark
25
narrow histone mark
12
transcription factor
8
RNA binding protein
Date released
April, 2019
40
May, 2024
35
February, 2023
33
June, 2019
15
May, 2019
12
February, 2021
5
October, 2019
4
July, 2019
Available data
177
bigWig
168
tsv
155
bam
144
bed narrowPeak
48
bigBed narrowPeak
30
bed bed3+
30
bed broadPeak
30
bigBed broadPeak
8
bed bedMethyl
8
bigBed bedMethyl
6
tagAlign
3
bedpe bed3+
3
hic
Organism
144
Homo sapiens
Biosample type
126
tissue
12
cell line
6
primary cell
Organ
414
liver
214
pancreas
203
brain
165
kidney
151
epithelium
144
heart
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
144
AMP
Genome assembly (visualization)
144
GRCh38
66
hg19
Lab
104
AMP-T2D consortium
40
Patrick T. Ellinor, Broad
Audit category:
4
inconsistent ontology term
files.file_type!
txt
month_released!
April, 2019
May, 2020
BIOSAMPLE
ASSAY
144 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
DNase-seq
tissue
coronary artery
3
36
2
left cardiac atrium
40
1
heart
5
18
right atrium auricular region
7
1
2
heart left ventricle
2
3
+ See 2 more…
cell line
smooth muscle cell of the coronary artery
4
8
primary cell
cardiac fibroblast
3
3
See all biosamples
Download