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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
6
ATAC-seq
Assay category
123
DNA binding
6
DNA accessibility
Target of assay
66
histone
66
histone modification
57
transcription factor
39
broad histone mark
27
narrow histone mark
15
RNA binding protein
3
chromatin remodeller
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
185
bam
171
fastq
133
bigWig
129
bed narrowPeak
101
bigBed narrowPeak
15
bed bed3+
14
tagAlign
4
bed broadPeak
2
tsv
Organism
129
Homo sapiens
Biosample type
93
tissue
34
in vitro differentiated cells
2
stem cell
Organ
50
liver
44
pancreas
16
epithelium
8
embryo
6
adipose tissue
6
brain
6
connective tissue
1
spleen
Project
129
AMP
Genome assembly (visualization)
129
GRCh38
129
hg19
Lab
129
AMP-T2D consortium
Audit category:
27
inconsistent control
2
inconsistent ontology term
Audit category:
3
missing controlled_by
Audit category:
12
inconsistent control read length
files.file_type!
vcf
BIOSAMPLE
ASSAY
129 results
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Clear Filters
ChIP-seq
ATAC-seq
tissue
body of pancreas
25
4
liver
29
endocrine pancreas
14
right lobe of liver
7
brain
6
+ See 4 more…
in vitro differentiated cells
hepatocyte
14
pancreatic endoderm
6
Posterior foregut
4
definitive endodermal cell
4
primitive gut cell
4
+ See 1 more…
stem cell
hESC
2
See all biosamples
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