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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
41
ChIP-seq
33
DNase-seq
Assay category
41
DNA binding
33
DNA accessibility
Target of assay
38
histone
38
histone modification
20
broad histone mark
18
narrow histone mark
3
transcription factor
Date released
41
June, 2019
13
August, 2017
8
December, 2017
6
February, 2018
6
May, 2019
Available data
97
bigWig
93
bam
74
bed narrowPeak
47
bigBed narrowPeak
46
bed broadPeak
37
bed bed3+
33
bigBed broadPeak
29
fastq
23
tsv
15
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
hic
1
txt
Organism
74
Homo sapiens
Biosample type
51
tissue
14
in vitro differentiated cells
9
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
151
epithelium
133
vasculature
129
blood vessel
119
kidney
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
74
AMP
Genome assembly (visualization)
74
hg19
60
GRCh38
Lab
74
AMP-T2D consortium
Audit category:
10
inconsistent ontology term
Audit category:
3
inconsistent control read length
files.file_type!
xls
organ_slims!
thymus
BIOSAMPLE
ASSAY
74 results
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Clear Filters
ChIP-seq
DNase-seq
tissue
muscle of leg
6
13
muscle of arm
17
skeletal muscle tissue
13
forelimb muscle
1
hindlimb muscle
1
in vitro differentiated cells
pancreatic endoderm
12
Hepatic endoderm
2
primary cell
skeletal muscle satellite cell
7
skeletal muscle cell
1
1
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