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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
11
ChIP-seq
Assay category
33
DNA accessibility
11
DNA binding
Target of assay
27
histone
27
histone modification
broad histone mark
11
narrow histone mark
Date released
37
June, 2019
5
August, 2017
2
May, 2019
Available data
52
bigWig
49
bam
44
bed narrowPeak
39
bigBed narrowPeak
38
bed broadPeak
34
bed bed3+
33
bigBed broadPeak
9
tsv
7
tagAlign
4
bed bedMethyl
4
bigBed bedMethyl
2
bedpe bed3+
2
fastq
2
hic
1
txt
0
bedpe
Organism
44
Homo sapiens
Biosample type
39
tissue
5
primary cell
Organ
412
liver
168
kidney
147
pancreas
142
brain
134
heart
epithelium
92
vasculature
88
blood vessel
60
artery
59
connective tissue
58
limb
54
blood
54
bodily fluid
44
musculature of body
33
eye
18
ureter
13
adipose tissue
11
nerve
10
embryo
10
spleen
8
bone element
8
skeleton
8
vein
1
pituitary gland
Project
44
AMP
Genome assembly (visualization)
44
hg19
38
GRCh38
Lab
44
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
organ_slims!
epithelium
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
44 results
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DNase-seq
ChIP-seq
tissue
muscle of arm
17
muscle of leg
13
2
skeletal muscle tissue
5
forelimb muscle
1
hindlimb muscle
1
primary cell
skeletal muscle satellite cell
3
skeletal muscle cell
1
1
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