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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
68
ChIP-seq
7
DNase-seq
3
WGBS
Assay category
68
DNA binding
7
DNA accessibility
3
DNA methylation
Target of assay
68
transcription factor
26
RNA binding protein
15
recombinant protein
7
chromatin remodeller
3
other context
3
other post-translational modification
Date released
313
November, 2017
206
June, 2019
182
October, 2019
130
May, 2021
106
August, 2021
99
August, 2017
96
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
40
May, 2024
30
December, 2018
28
July, 2019
27
May, 2020
23
February, 2021
21
January, 2019
20
May, 2022
16
February, 2018
8
October, 2017
6
November, 2019
5
October, 2018
2
November, 2020
Available data
104
fastq
103
bam
78
bigWig
75
bed narrowPeak
75
bigBed narrowPeak
7
bed bed3+
7
bed broadPeak
7
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
csv
Organism
78
Homo sapiens
Biosample type
57
cell line
21
tissue
Organ
52
liver
pancreas
12
blood
12
bodily fluid
6
adipose tissue
6
connective tissue
6
spleen
2
brain
Project
78
AMP
Genome assembly (visualization)
78
GRCh38
73
hg19
Lab
78
AMP-T2D consortium
Audit category:
2
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
organ_slims!
pancreas
BIOSAMPLE
ASSAY
78 results
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ChIP-seq
DNase-seq
WGBS
cell line
HepG2
44
1
GM12878
12
tissue
liver
4
2
spleen
3
1
2
omental fat pad
3
1
brain
2
subcutaneous adipose tissue
2
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