Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
76
ATAC-seq
30
ChIP-seq
2
Hi-C
Assay category
76
DNA accessibility
30
DNA binding
2
3D chromatin structure
Target of assay
19
histone
19
histone modification
11
narrow histone mark
11
transcription factor
8
broad histone mark
1
RNA binding protein
Date released
313
November, 2017
210
June, 2019
193
October, 2019
142
August, 2017
133
May, 2021
108
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
39
November, 2019
38
May, 2022
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
13
March, 2020
12
October, 2017
7
July, 2019
5
September, 2017
3
October, 2022
2
November, 2020
1
March, 2019
1
March, 2023
Available data
123
tsv
106
bed narrowPeak
64
xls
57
txt
49
bam
47
bigWig
24
tagAlign
5
bed bed3+
2
bedpe bed3+
2
hic
1
vcf
Organism
108
Homo sapiens
Biosample type
65
tissue
25
in vitro differentiated cells
15
cell line
3
primary cell
Organ
65
kidney
18
liver
3
epithelium
2
connective tissue
Project
108
AMP
Genome assembly (visualization)
90
GRCh38
43
hg19
Lab
65
Katalin Susztak, Upenn
26
AMP-T2D consortium
15
Bing Ren, UCSD
2
Struan F.A. Grant, CHOP
month_released!
April, 2019
BIOSAMPLE
ASSAY
108 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
kidney
64
1
in vitro differentiated cells
neural progenitor cell
10
13
adipocyte
1
osteoblast
1
cell line
HepG2
14
1
primary cell
hepatocyte
3
Download