Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
14
ChIP-seq
10
total RNA-seq
6
WGBS
Assay category
14
DNA binding
10
Transcription
6
DNA methylation
Target of assay
11
transcription factor
3
histone
3
histone modification
2
narrow histone mark
1
RNA binding protein
1
broad histone mark
Date released
24
August, 2021
6
February, 2021
Available data
169
fastq
153
zippedFastqFolder
24
bigWig
16
tsv
14
bed narrowPeak
5
bedpe bed3+
5
hic
3
cool
1
bedpe
1
vcf
Organism
30
Homo sapiens
Biosample type
23
cell line
6
primary cell
1
tissue
Organ
23
liver
7
pancreas
6
epithelium
Project
24
AMP
6
HPAP
Genome assembly (visualization)
14
hg19
Lab
3031
AMP-T2D consortium
228
Kyle Gaulton, UCSD
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
24
Bing Ren, UCSD
20
Karen Mohlke, UNC
6
Klaus Kaestner, Upenn
4
Struan F.A. Grant, CHOP
BIOSAMPLE
ASSAY
30 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
WGBS
cell line
HepG2
14
9
primary cell
pancreatic alpha cell
6
tissue
islet of Langerhans
1
Download