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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 83ChIP-seq
  • 8ATAC-seq
  • 1FAIRE-seq
Assay category
  • 83DNA binding
  • 9DNA accessibility
Target of assay
  • 68transcription factor
  • 15histone
  • 15histone modification
  • 12broad histone mark
  • 12recombinant protein
  • 3chromatin remodeller
  • 3narrow histone mark
  • 1RNA binding protein
Date released
  • 38December, 2017
  • 26November, 2017
  • 16August, 2017
  • 5November, 2018
  • 5September, 2017
  • 2January, 2019
Available data
  • 166fastq
  • 144bam
  • 110bigWig
  • 92bed narrowPeak
  • 76bigBed narrowPeak
  • 40zippedFastqFolder
  • 11bed bed3+
  • 5bed broadPeak
  • 5tsv
  • 4bigBed broadPeak
Organism
  • 92Homo sapiens
Biosample type
  • 42tissue
  • 28cell line
  • 12in vitro differentiated cells
  • 8primary cell
  • 2stem cell
Organ
  • 62liver
  • 14pancreas
  • 8epithelium
  • 3connective tissue
  • 3embryo
  • 2blood
  • 2bodily fluid
Project
  • 92AMP
Genome assembly (visualization)
  • 92hg19
  • 91GRCh38
Lab
  • 92AMP-T2D consortium
Audit category:
  • 27inconsistent control
Audit category:
  • 19inconsistent control read length
BIOSAMPLE
ASSAY

92 results

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Clear Filters
ChIP-seq
ATAC-seq
FAIRE-seq
tissue
liver36
pancreas41
islet of Langerhans1
cell line
HepG226
GM128782
in vitro differentiated cells
adipocyte3
pancreatic endoderm3
Posterior foregut2
definitive endodermal cell2
primitive gut cell2
primary cell
pancreatic alpha cell3
pancreatic beta cell3
pancreatic acinar cell2
stem cell
hESC2
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