Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 170ChIP-seq
Assay category
  • 170DNA binding
Target of assay
  • 104transcription factor
  • 69recombinant protein
  • 66histone
  • 66histone modification
  • 37broad histone mark
  • 29narrow histone mark
  • 12RNA binding protein
  • 11chromatin remodeller
  • 3other context
  • 3other post-translational modification
Date released
  • 69November, 2017
  • 31August, 2017
  • 21November, 2018
  • 19December, 2017
  • 17October, 2018
  • 11January, 2019
  • 2December, 2018
Available data
  • 203fastq
  • 193bam
  • 180bigWig
  • 170bed narrowPeak
  • 140bigBed narrowPeak
  • 1zippedFastqFolder
Organism
  • 170Homo sapiens
Biosample type
  • 94cell line
  • 44in vitro differentiated cells
  • 31tissue
  • 1primary cell
Organ
  • 104liver
  • 30connective tissue
  • 17pancreas
  • 14epithelium
  • 9blood
  • 9bodily fluid
  • 9spleen
Project
  • 170AMP
Genome assembly (visualization)
  • 170GRCh38
  • 167hg19
Lab
  • 170AMP-T2D consortium
Audit category:
  • 1inconsistent control
Audit category:
  • 1missing controlled_by
Audit category:
  • 4inconsistent control read length
  • 1inconsistent assembly
  • 1inconsistent control run_type
BIOSAMPLE
ASSAY

170 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
cell line
HepG285
GM128789
in vitro differentiated cells
adipocyte30
hepatocyte14
tissue
body of pancreas17
spleen9
right lobe of liver5
primary cell
skeletal muscle myoblast1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego